search

stan-dev / rstantools

Tools for Developing R Packages Interfacing with Stan
https://mc-stan.org/rstantools
GNU General Public License v3.0
51 stars 21 forks source link

Error Please install the 'usethis' package to use this function. #37

Closed stemangiola closed 6 years ago

stemangiola commented 6 years ago

Hello,

I have this error when following the instructions (which I solved installing such package):

library("rstantools") This is rstantools version 1.5.0 rstan_package_skeleton(path = 'TABI') Error in rstan_package_skeleton(path = "TABI") : Please install the 'usethis' package to use this function.

sessionInfo() R version 3.4.3 (2017-11-30) Platform: x86_64-pc-linux-gnu (64-bit) Running under: CentOS release 6.4 (Final)

Matrix products: default BLAS: /wehisan/general/system/bioinf-software/bioinfsoftware/R/R-3.4.3/lib64/R/lib/libRblas.so LAPACK: /wehisan/general/system/bioinf-software/bioinfsoftware/R/R-3.4.3/lib64/R/lib/libRlapack.so

locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] rstantools_1.5.0 bindrcpp_0.2.2 tidybayes_0.12.0.000002 rstan_2.17.3
[5] StanHeaders_2.17.2 forcats_0.3.0 stringr_1.3.1 dplyr_0.7.5
[9] purrr_0.2.4 readr_1.1.1 tidyr_0.8.1 tibble_1.4.2
[13] ggplot2_2.2.1 tidyverse_1.2.1 foreach_1.4.4

loaded via a namespace (and not attached): [1] Rcpp_0.12.17 lubridate_1.7.1 lattice_0.20-35 listenv_0.7.0
[5] assertthat_0.2.0 digest_0.6.15 psych_1.8.3.3 R6_2.2.2
[9] cellranger_1.1.0 plyr_1.8.4 ggridges_0.5.0 stats4_3.4.3
[13] ggstance_0.3 coda_0.19-1 httr_1.3.1 pillar_1.1.0
[17] rlang_0.2.0 lazyeval_0.2.1 readxl_1.0.0 rstudioapi_0.7
[21] simplexRegression_0.1.0 labeling_0.3 foreign_0.8-69 munsell_0.4.3
[25] ARMET_1.0 broom_0.4.3 compiler_3.4.3 modelr_0.1.1
[29] pkgconfig_2.0.1 mnormt_1.5-5 globals_0.11.0 tidyselect_0.2.4
[33] gridExtra_2.3 arrayhelpers_1.0-20160527 codetools_0.2-15 doFuture_0.6.0
[37] future_1.8.0 crayon_1.3.4 MASS_7.3-49 grid_3.4.3
[41] nlme_3.1-137 jsonlite_1.5 gtable_0.2.0 magrittr_1.5
[45] scales_0.5.0 KernSmooth_2.23-15 cli_1.0.0 stringi_1.2.2
[49] LaplacesDemon_16.1.0 reshape2_1.4.3 xml2_1.2.0 iterators_1.0.9
[53] tools_3.4.3 svUnit_0.7-12 glue_1.2.0 hms_0.4.2
[57] parallel_3.4.3 yaml_2.1.19 inline_0.3.14 colorspace_1.3-2
[61] rvest_0.3.2 knitr_1.20 bindr_0.1.1 haven_1.1.1

bgoodri commented 6 years ago

"Please install the 'usethis' package to use this function."

On Wed, May 23, 2018 at 8:43 PM, stemangiola notifications@github.com wrote:

Hello,

I have this error when following the instructions (which I solved installing such package):

library("rstantools") This is rstantools version 1.5.0 rstan_package_skeleton(path = 'TABI') Error in rstan_package_skeleton(path = "TABI") : Please install the 'usethis' package to use this function.

sessionInfo() R version 3.4.3 (2017-11-30) Platform: x86_64-pc-linux-gnu (64-bit) Running under: CentOS release 6.4 (Final)

Matrix products: default BLAS: /wehisan/general/system/bioinf-software/bioinfsoftware/R/R-3.4.3/ lib64/R/lib/libRblas.so LAPACK: /wehisan/general/system/bioinf-software/bioinfsoftware/R/R-3.4.3/ lib64/R/lib/libRlapack.so

locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 LC_PAPER=en_US.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] rstantools_1.5.0 bindrcpp_0.2.2 tidybayes_0.12.0.000002 rstan_2.17.3 [5] StanHeaders_2.17.2 forcats_0.3.0 stringr_1.3.1 dplyr_0.7.5 [9] purrr_0.2.4 readr_1.1.1 tidyr_0.8.1 tibble_1.4.2 [13] ggplot2_2.2.1 tidyverse_1.2.1 foreach_1.4.4

loaded via a namespace (and not attached): [1] Rcpp_0.12.17 lubridate_1.7.1 lattice_0.20-35 listenv_0.7.0 [5] assertthat_0.2.0 digest_0.6.15 psych_1.8.3.3 R6_2.2.2 [9] cellranger_1.1.0 plyr_1.8.4 ggridges_0.5.0 stats4_3.4.3 [13] ggstance_0.3 coda_0.19-1 httr_1.3.1 pillar_1.1.0 [17] rlang_0.2.0 lazyeval_0.2.1 readxl_1.0.0 rstudioapi_0.7 [21] simplexRegression_0.1.0 labeling_0.3 foreign_0.8-69 munsell_0.4.3 [25] ARMET_1.0 broom_0.4.3 compiler_3.4.3 modelr_0.1.1 [29] pkgconfig_2.0.1 mnormt_1.5-5 globals_0.11.0 tidyselect_0.2.4 [33] gridExtra_2.3 arrayhelpers_1.0-20160527 codetools_0.2-15 doFuture_0.6.0 [37] future_1.8.0 crayon_1.3.4 MASS_7.3-49 grid_3.4.3 [41] nlme_3.1-137 jsonlite_1.5 gtable_0.2.0 magrittr_1.5 [45] scales_0.5.0 KernSmooth_2.23-15 cli_1.0.0 stringi_1.2.2 [49] LaplacesDemon_16.1.0 reshape2_1.4.3 xml2_1.2.0 iterators_1.0.9 [53] tools_3.4.3 svUnit_0.7-12 glue_1.2.0 hms_0.4.2 [57] parallel_3.4.3 yaml_2.1.19 inline_0.3.14 colorspace_1.3-2 [61] rvest_0.3.2 knitr_1.20 bindr_0.1.1 haven_1.1.1

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/stan-dev/rstantools/issues/37, or mute the thread https://github.com/notifications/unsubscribe-auth/ADOrqjwHQf0NefoSNyu2yQM86YJCOQF7ks5t1gIxgaJpZM4ULZHj .

stemangiola commented 6 years ago

Sure, that was clear.

I'm not sure why this was not done automatically. (It happens for some of my packages as well and still I don't understand why this installations are not taken care automatically.)

bgoodri commented 6 years ago

It is in Suggests rather than Imports, because it is not needed for any other function in rstantools.

On Wed, May 23, 2018 at 9:33 PM, stemangiola notifications@github.com wrote:

Sure, that was clear.

I'm not sure why this was not done automatically. (It happens for some of my packages as well and still I don't understand why this installations are not taken care automatically.)

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/stan-dev/rstantools/issues/37#issuecomment-391559074, or mute the thread https://github.com/notifications/unsubscribe-auth/ADOrqnN2OE1iWFKJ-zB-wX_S7A8gC8Buks5t1g32gaJpZM4ULZHj .

stemangiola commented 6 years ago

OK, thanks.