I have created a script to convert the output of Vaquita to an output compatible with the rest of the analysis.
I've also made some small fixes to issues that I found, namely with Sniffles regex sometimes missing the SV type... Also with the path to the conversion scripts.
Hello!
I have created a script to convert the output of Vaquita to an output compatible with the rest of the analysis.
I've also made some small fixes to issues that I found, namely with Sniffles regex sometimes missing the SV type... Also with the path to the conversion scripts.