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statOmics / msqrob2

Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure
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Error in Msqob #14

Closed ococrook closed 4 years ago

ococrook commented 4 years ago

The following error in the ecoliSpikeIn.rmd. I haven't spent much time debugging

 pe <- msqrob(object = pe, i = "protein", formula = ~condition,  modelColumnName = "ridge", ridge = TRUE)

Error in if (m == 0) { : missing value where TRUE/FALSE needed

ococrook commented 4 years ago

fixed

ekglover commented 1 year ago

Hello, would you be able to share how you fixed this? I am having the same problem. I appreciate it was a while ago! Thanks, Emily

lgatto commented 1 year ago

Probably by installing the very latest version with 

BiocManager::install("statOmics/msqrob2")

but Olly will confirm.

ekglover commented 1 year ago

Was a problem with my data. Needed more than 1 sample per group.