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statdivlab / corncob

Count Regression for Correlated Observations with the Beta-binomial
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Address concerns about `contrastsTest()` and make small fixes to pass cran checks #165

Closed svteichman closed 9 months ago

svteichman commented 9 months ago

Add data to change the examples and test case for the function contrastsTest(), which works fine but was not compatible with the previous example. Add a warning about the package limma, which is under "Suggests", but needs to be installed before using the contrastsTest() function.

Additionally make minor changes to the vignette and documentation to pass cran checks and reflect the new github url for corncob.

codecov-commenter commented 9 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

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Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #165 +/- ## ======================================= Coverage ? 94.21% ======================================= Files ? 34 Lines ? 1158 Branches ? 0 ======================================= Hits ? 1091 Misses ? 67 Partials ? 0 ```

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