statgen / EPACTS

GNU General Public License v3.0
34 stars 20 forks source link

Different Results Using plink and epacts lm #26

Open marine11 opened 4 years ago

marine11 commented 4 years ago

Hello The result of using --linear for plink and lm for epacts, Each snp has a different p-value value. Using linear regression, the p-value shouldn't be much different, but is there another reason?