search

statgen / Minimac4

GNU General Public License v3.0
56 stars 20 forks source link

KEEP unimputed issuse #7

Open online-translation opened 6 years ago

online-translation commented 6 years ago

Hi, I has a chipped data, some of variants was not covered by the imputation panel, but I want to keep all of them into the imputed result, does minimac proivides such function, if yes, then which parameters should i use?

Thanks a lot.

Santy-8128 commented 6 years ago

Yes, on minimac3/4 you can use --allTypedSites to have all variants in the final output file.

Regards, Sayantan Das,

Post-Doctoral Fellow Department of BiostatisticsUniversity of Michigan, Ann Arbor.MI 48109-2029

On Tue, May 29, 2018 at 8:58 PM, online-translation < notifications@github.com> wrote:

Hi, I has a chipped data, some of variants was not covered by the imputation panel, but I want to keep all of them into the imputed result, does minimac proivides such function, if yes, then which parameters should i use?

Thanks a lot.

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/statgen/Minimac4/issues/7, or mute the thread https://github.com/notifications/unsubscribe-auth/AHuICKfPnQp1yWkoqal7MlQTU30Eu1s9ks5t3hjVgaJpZM4USj5N .