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statgen / bamUtil

http://genome.sph.umich.edu/wiki/BamUtil
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No output #14

Open AmirKamali opened 9 years ago

AmirKamali commented 9 years ago

I sometimes bump into this problem with bam diff tool, it seems the comparison does not begin. unfortunately i couldn't upload bam/sam files here.

mktrost commented 9 years ago

Hmm, can you provide additional info? Or if you can't post it here, can you send it to mktrost@umich.edu? Thanks!

cjieming commented 5 years ago

Hi has this been resolved? I encountered a similar issue. There was no output generated from the --out option, meaning I have stipulated the --out outfile.txt but there was no file at all.

hisplan commented 5 years ago

It seems that it generates no output file even with --out if the two inputs are exactly identical. Could someone please verify this?