statgen / demuxlet

Genetic multiplexing of barcoded single cell RNA-seq
Apache License 2.0
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arrays for snp detection #100

Open guillemsanchezsanchez1996 opened 1 year ago

guillemsanchezsanchez1996 commented 1 year ago

Dear Demuxlet team,

I am writing to express my gratitude for developing such a cool software tool for single-cell RNA sequencing data analysis. Demuxlet can be really helpful in my future experiments, and I appreciate the effort and expertise that went into creating it.

I have a question regarding the experimental part before running your software, which may be a little off-topic for your team's knowledge. I apologize in advance for any inconvenience. I am relatively new to the field of genotyping, and I am wondering if you could provide any recommendations on which arrays to use for SNP detection. Specifically, I am interested in arrays that offer high-quality data while also being cost-effective.

I would appreciate any insights you might have on this matter. Thank you again for your hard work and for creating such a valuable tool for the scientific community.

Best regards,

Guillem