Closed papanikos closed 6 years ago
Hello,
The N.SNP in the best output now shows the number of SNPs that are covered for each barcode/droplet. Is there a way to get the actual positions of these SNPs?
best
hi nikos, we have no plans to support this currently. however, there is a hidden --pileup mode feature that might be what you need.
--pileup
Hello,
The N.SNP in the
best
output now shows the number of SNPs that are covered for each barcode/droplet. Is there a way to get the actual positions of these SNPs?