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statgen / fastQValidator

Validate FastQ Files
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install error #2

Closed u14183 closed 11 years ago

u14183 commented 12 years ago

make install INSTALLDIR=/opt/Bio/fastQValidator1

Creating directory /opt/Bio/fastQValidator1

Installing to directory /opt/Bio/fastQValidator1 To select a different directory, run

make install INSTALLDIR=your_preferred_dir

cp /opt/Bio/fastQValidator1 cp: missing destination file operand after /opt/Bio/fastQValidator1' Trycp --help' for more information. make[2]: * [install] Error 1 make[2]: Leaving directory `/opt/Bio/fastQValidator_0.1.1/fastQValidator/src' make[1]: * [src] Error 2 make[1]: Leaving directory`/opt/Bio/fastQValidator_0.1.1/fastQValidator' make: *\ [fastQValidator/] Error 2

version 0.1.1

mktrost commented 12 years ago

Thank you for letting me know about this error.

This was an error in the libStatGen repository. I have fixed this in the current development version of libStatGen, but have not yet created a release.

Two options:

1) You can hand fix the problem by making the same change as here: https://github.com/statgen/libStatGen/commit/290be7ac1af1dfc8d50863167acd4db698f05633 Updating libStatGen/Makefiles/Makefile.src line 75, replacing PROG with PROG_OPT.

2) You can use git and do a git clone/git pull of libStatGen from github. That will get you the latest development version. If you would like to do this and have questions on how, please let me know and I can provide additional details.

Please let me know if this fixes your problem. Thanks!