statgen / locuszoom-standalone

Create regional association plots from GWAS or meta-analysis
http://locuszoom.org/
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--bed-tracks option is not working #11

Open Diwadkar opened 4 years ago

Diwadkar commented 4 years ago

I am trying to run the following command : locuszoom --build hg38 --metal SNPs.txt --pop EUR --source 1000G_Nov2014 --refgene BIRC3 --bed-tracks chip_seq.bed

However, the plot generated does not include the bed tracks in it, nor does it pop up in the "Options in effect" table. What could be going wrong here?