statgen / pheweb

A tool to build a website to browse hundreds or thousands of GWAS.
MIT License
158 stars 65 forks source link

update HTML from about page #131

Closed anasanchezlucas closed 4 years ago

anasanchezlucas commented 4 years ago

Good afternoon, I'm trying to customize the About page on my Pheweb. I have made my own version of about/content.html based on the template and it's not working. The old text is still appearing.Do I have to modify any other file? I have tried to run everything from scratch and it doesn't work either.

Any help would be appreciated.

Thank you

Ana

pjvandehaar commented 4 years ago

Is this your directory layout? custom_templates/ is a sibling of generated-by-pheweb.

┣ generated-by-pheweb/
┗ custom_templates/
   ┗ about/
      ┗ content.html

custom_templates/about/content.html should just be the content you want to show, like

<p>Results displayed in this PheWeb include genome-wide associations for EHR-derived ICD billing codes from the White British participants of the UK Biobank. Phenotypes were classified into 1,403 broad PheWAS codes with counts ranging from 51 – 77,977 cases and 330,366 – 408,908 controls. All individuals were imputed using the Haplotype Reference Consortium panel, resulting in >20 million variants. Analyses on binary outcomes were conducted using SAIGE (a generalized mixed model association test that uses the saddlepoint approximation to account for case-control imbalance), adjusting for genetic relatedness, sex, birth year and the first 4 principal components. All genomic positions are on GRCh37.</p>

<p>This site was built with <a href="https://github.com/statgen/pheweb/">PheWeb</a> version {{ config.PHEWEB_VERSION }}.</p>

What's your pheweb --version?

How are you running the server? Do you just go to the directory that contains both custom_templates/ and also generated-by-pheweb/ and run pheweb serve? Do you have a config.py there?

anasanchezlucas commented 4 years ago

Thank you, we have solved the problem. We had the custom_templates folder in the wrong place, by taking it out to our directory layout now is working!

Best regards,

Ana

pjvandehaar commented 4 years ago

I'm glad it's working for you! Feel free to open an issue or email me if you have other questions about PheWeb.