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statgen / pheweb

A tool to build a website to browse hundreds or thousands of GWAS.
MIT License
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No plots in variant page #137

Closed stat-yyang closed 4 years ago

stat-yyang commented 4 years ago
Screen Shot 2020-07-13 at 8 43 09 AM

Hi, It seems that there is no plot in the variant page. On our website, http://67.205.180.40:443/variant/10:134299394-A-AG is an example.

Do you know what happened?

Thanks! Yue

Shicheng-Guo commented 4 years ago

Same problem here: "No plots in variant page"

pjvandehaar commented 4 years ago

@stat-yyang I can't access that page so I don't know. Could you open devtools' networking tab and console and check for any errors? Can you make the site reachable for me? Could you send me the raw html of that page? Could you send me a screenshot of http://67.205.180.40:443/api/variant/10:134299394-A-AG ?

stat-yyang commented 4 years ago

@stat-yyang I can't access that page so I don't know. Could you open devtools' networking tab and console and check for any errors? Can you make the site reachable for me? Could you send me the raw html of that page? Could you send me a screenshot of http://67.205.180.40:443/api/variant/10:134299394-A-AG ?

The website is rebuilt, you can visit it via http://67.205.180.40:443. I have made it public the website now. The raw html page can be accessed in the web page.

@pjvandehaar The devtools displayed an error message like this:

Screen Shot 2020-07-14 at 1 00 06 PM

This is a screenshot of http://67.205.180.40:443/api/variant/10:134299394-A-AG

Screen Shot 2020-07-14 at 12 54 07 PM
pjvandehaar commented 4 years ago

Can you tell me the version number in pheweb --help? It looks like you're on an older version and there's some bug with the URL used to load the LocusZoom.js javascript library. Could you update (either via python3 -m pip install --update pheweb or git pull && python3 -m pip install -e ., depending on how you installed in the first place), and then re-run the pheweb serve process?

Nice work with the site– it looks great.

stat-yyang commented 4 years ago

Thanks a lot! I upgraded pheweb version to 1.1.21 and now it looks good!

many thanks