Starting `pheweb add-rsids`, Completed in 57 minutes

[jielab]

Hi, there:

I am using PheWeb version 1.3.16.

My config.py file is as below:

hg_build_number = 19
assoc_max_maf = 1
show_correlations = False
show_manhattan_filter_button = True
cache = "/mnt/d/data/dbsnp/"
field_aliases = {'CHR':'chrom'

My pheweb command works fine. However, as I wrote in the title, it took 57 minutes to add-rsids for only 2 GWAS. My GWAS file already have rsIDs in the "SNP" column.

How could I tell pheweb NOT to add-rsids since my GWAS already have them?

Best regards, Jie

[pjvandehaar]

There's not a way to do that. It would require changing ~5 lines of code.

[jielab]

I will shut up, from now on. Wish your amazing software is enjoyed by a lot users.