Getting the following error when using a vcf output filename with the extension of vcf.bgz.
Failed to open file "/restricted/projectnb/cadre/adsp/r4/vcf.preview/autosomes/gcad.preview.r4.wgs.36361.GATK.2022.08.15.biallelic.genotypes.abhet.ruth.chr22.ALL.vcf.bgz"
A simple workaround is to use the extension vcf.gz but it would be nice to handle to vcf.bgz.
Getting the following error when using a vcf output filename with the extension of vcf.bgz. Failed to open file "/restricted/projectnb/cadre/adsp/r4/vcf.preview/autosomes/gcad.preview.r4.wgs.36361.GATK.2022.08.15.biallelic.genotypes.abhet.ruth.chr22.ALL.vcf.bgz"
A simple workaround is to use the extension vcf.gz but it would be nice to handle to vcf.bgz.