statgenetics / seqspark

SEQSpark documentation
https://statgenetics.github.io/seqspark/
Apache License 2.0
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Negative p-values from SKAT-O #12

Open jbgaither opened 2 years ago

jbgaither commented 2 years ago

I have SeqSpark working, but some of my SKAT-O runs have resulted in negative p-values (e.g. -3e-7).

Obviously this is incorrect. But wondering if this is is a known issue in SeqSpark/SKAT-O in general? Also, do the authors have any idea of the cause? Thanks!