Open ckastall opened 4 years ago
Thank you for this very useful package.
Trying to simulate long sequences I have the following error message:
The sum of the partition lengths in the treefile does not equal the specified number of sites.
This seems to happen only if I define a model with loci_length > 99998.
loci_length > 99998
Here is the exact commands I am running:
# No problem with this model: model <- coal_model(c(20, 1), 2, loci_length = 99998) + feat_outgroup(2) + feat_pop_merge(0.5, 2, 1) + feat_mutation(5, model = "GTR", gtr_rates = 1:6) res <- simulate(model) # This one won't run: model <- coal_model(c(20, 1), 2, loci_length = 99999) + feat_outgroup(2) + feat_pop_merge(0.5, 2, 1) + feat_mutation(5, model = "GTR", gtr_rates = 1:6) res <- simulate(model)
I have tried with both simulators scrm and ms, the problem seems to be the same.
Thank you for this very useful package.
Trying to simulate long sequences I have the following error message:
This seems to happen only if I define a model with
loci_length > 99998
.Here is the exact commands I am running:
I have tried with both simulators scrm and ms, the problem seems to be the same.