Open percolator opened 2 years ago
MatthewThe
commented
2 years ago Not sure what the CMake errors mean, but it should be using the Boost version from ProteoWizard (v1.76.0) at /tmp/tst/build/ubuntu64/tools/ and not v1.71.0 from /usr/lib/....
Do you still have the full build log? Perhaps the ProteoWizard build failed.
percolator
commented
2 years ago Yes, it seems to be the install_proteowizard.sh scripts that fails to get the right download. Could proteowizard have changed their naming conventions?
--Lukas
On Mon, Jun 27, 2022 at 6:59 PM MatthewThe @.***> wrote:
Not sure what the CMake errors mean, but it should be using the Boost version from ProteoWizard (v1.76.0) at /tmp/tst/build/ubuntu64/tools/ and not v1.71.0 from /usr/lib/....
Do you still have the full build log? Perhaps the ProteoWizard build failed.
— Reply to this email directly, view it on GitHub https://github.com/statisticalbiotechnology/maracluster/issues/24#issuecomment-1167577488, or unsubscribe https://github.com/notifications/unsubscribe-auth/AAAXKAAD7SHQXDG3PLLNMZLVRHMVDANCNFSM5Z6O7D2A . You are receiving this because you authored the thread.Message ID: @.***>
percolator
commented
2 years ago I forgot to attach error logs. $ cat pwiz_installation.log /tmp/maracluster/..//maracluster/admin/builders/install_proteowizard.sh: line 30: ./quickbuild.sh: No such file or directory
and the maracluster quick_build log is attached
On Tue, Jun 28, 2022 at 12:51 PM Lukas Käll @.***> wrote:
Yes, it seems to be the install_proteowizard.sh scripts that fails to get the right download. Could proteowizard have changed their naming conventions?
--Lukas
On Mon, Jun 27, 2022 at 6:59 PM MatthewThe @.***> wrote:
Not sure what the CMake errors mean, but it should be using the Boost version from ProteoWizard (v1.76.0) at /tmp/tst/build/ubuntu64/tools/ and not v1.71.0 from /usr/lib/....
Do you still have the full build log? Perhaps the ProteoWizard build failed.
— Reply to this email directly, view it on GitHub https://github.com/statisticalbiotechnology/maracluster/issues/24#issuecomment-1167577488, or unsubscribe https://github.com/notifications/unsubscribe-auth/AAAXKAAD7SHQXDG3PLLNMZLVRHMVDANCNFSM5Z6O7D2A . You are receiving this because you authored the thread.Message ID: @.***>
I get errors when compiling maracluster on my ubuntu 20.04 installation. Do you understand what is wrong?
$ git clone git@github.com:statisticalbiotechnology/maracluster.git; cd maracluster; bash quickbuild.sh [.....]
Architecture: amd64 -- Checking packages: CMake Error at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.71.0/BoostConfig.cmake:117 (find_package): Found package configuration file:
/usr/lib/x86_64-linux-gnu/cmake/boost_filesystem-1.71.0/boost_filesystem-config.cmake
but it set boost_filesystem_FOUND to FALSE so package "boost_filesystem" is considered to be NOT FOUND. Reason given by package:
No suitable build variant has been found.
The following variants have been tried and rejected:
libboost_filesystem.so.1.71.0 (shared, Boost_USE_STATIC_LIBS=ON)
libboost_filesystem.a (shared runtime, Boost_USE_STATIC_RUNTIME=ON)
Call Stack (most recent call first): /usr/lib/x86_64-linux-gnu/cmake/Boost-1.71.0/BoostConfig.cmake:182 (boost_find_component) /usr/share/cmake-3.16/Modules/FindBoost.cmake:443 (find_package) src/CMakeLists.txt:22 (find_package)
-- Configuring incomplete, errors occurred! See also "/tmp/tst/build/ubuntu64/maracluster/CMakeFiles/CMakeOutput.log".