inital commit of validation script using XTandem, Comet, MSGF+

statisticalbiotechnology / representative-spectra-benchmark

Analysis of different consensus spectrum construction methods

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inital commit of validation script using XTandem, Comet, MSGF+ #14

Closed timosachsenberg closed 4 years ago

timosachsenberg commented 4 years ago

sh validate_mgfs.sh mgffilename.mgf will run three searches and output the total number of identified clusters at 1% FDR for each of them Starting point for some more elaborate benchmarking scripts. What file format would you like to have the filtered data in? mzIdentML or some csv?