statonlab / hardwoods_site

Hardwoods Genomics bugs, data loading, and general issues
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American beech GWAS #350

Open mestato opened 6 years ago

mestato commented 6 years ago

American beech GWAS: https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-3931-z

MattHuff commented 6 years ago

Raw data for this project is here: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA321730/

patricksis commented 6 years ago

So many transcriptome file do not know which one to use https://www.ncbi.nlm.nih.gov/sra?linkname=bioproject_sra_all&from_uid=321730

mestato commented 6 years ago

All of them :) These are ten trees from the same study - you can tell because they all have the same bioproject. that requires some clicking to figure out, but thats the definitive way to tell if raw data is all part of one study.