search

statonlab / hardwoods_site

Hardwoods Genomics bugs, data loading, and general issues
GNU General Public License v3.0
2 stars 1 forks source link

Casuarina equisetifolia genome #452

Open mestato opened 5 years ago

mestato commented 5 years ago

Feature description

De novo genome assembly of the stress tolerant forest species Casuarina equisetifolia provides insight into secondary growth (Ye et al)

https://onlinelibrary.wiley.com/doi/abs/10.1111/tpj.14159

Link to relevant info

RaymondS1 commented 5 years ago

@mestato I found the Gff and genome for this organism, but not the CDS or protein files. https://www.ncbi.nlm.nih.gov/genome?LinkName=nuccore_genome&from_uid=1517459956

RaymondS1 commented 5 years ago

https://hardwoods.ag.utk.edu/organism/Casuarina/equisetifolia Organism created

https://hardwoods.ag.utk.edu/Publication/2768050 Publication

https://hardwoods.ag.utk.edu/BLAST-annotation/2768052 SwissProt Annotation

https://hardwoods.ag.utk.edu/BLAST-annotation/2768055 Trembl Annotation

https://hardwoods.ag.utk.edu/InterProScan-annotation/2768056 Interpro Scan Annotation

https://hardwoods.ag.utk.edu/KEGGresults/2768057 Kegg Annotation