statonlab / hardwoods_site

Hardwoods Genomics bugs, data loading, and general issues
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XRay ontology explorer from/for an analysis? #473

Closed mestato closed 5 years ago

mestato commented 5 years ago

Feature description

As a user if I was looking at a reference genome or a reference transcriptome, I might want to explore the GO terms or the KEGG terms for the features derived from that analysis (genes or mRNA-polypeptides). However, you have to know to go back to the organism page to do this, which isn't very intuitive and might make it difficult to discover. Two possible solutions:

Link to relevant info

almasaeed2010 commented 5 years ago

Both options are feasible. XRay already limits by analysis which means the code to get annotations from an analysis instead of organism is already there and would just need a little tweaking to work.

almasaeed2010 commented 5 years ago

Done on live.

Example analysis: https://hardwoodgenomics.org/Genome-assembly/2243625 Look for ontology browser in the summary table.

@mestato does this suffice?

mestato commented 5 years ago

Yes. Lets change to "Gene Ontology" instead of just ontology and also add a KEGG link

almasaeed2010 commented 5 years ago

done