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statonlab / hardwoods_site

Hardwoods Genomics bugs, data loading, and general issues
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"No BLAST results found" for feature pane #520

Closed mestato closed 5 years ago

mestato commented 5 years ago

Feature description

If a feature has no BLASt homology, then the BLAST pane doesn't show up. However, this is a bit confusing - its not clear that a BLAST was tried. I think we need a way to display "no homology found" (IE signaling to the user this is super suspecious or super unique) if the analysis was run on the feature but nothing identified. not sure if this would be at the loading level (would be nice but involves getting into the blast module) or at the feature bundle (within our scope to alter, but how to know if the feature has been run against blast?)

Link to relevant info

Example chestnut feature with no BLAST result: https://www.hardwoodgenomics.org/bio_data/3035466?tripal_pane=group_sequence_tripalpane

This probably should be similar for IPS

almasaeed2010 commented 5 years ago

Tripal allows us to specify (on a bundle level) whether we want to hide empty fields or display a message saying no content was found. However, doing this means it affects all fields and not only blast.

mestato commented 5 years ago

Lets move this over to the BLAST issue queue as a feature request.

almasaeed2010 commented 5 years ago

ok this may have been actually solved in the newest release without us realizing it. The link you shared now has a tab showing an empty chart. https://www.hardwoodgenomics.org/bio_data/3035466?tripal_pane=group_homology

Does that work?

mestato commented 5 years ago

Yeah its ok (typos not withstanding).