Fields settings are all wrong

[almasaeed2010]

Bug description

All of our custom fields define chado tables and columns to auto handle data insertion, retrieving and deleting. However, most of our fields don't provide a widget and should not be defining a this information. This could cause fields to insert or delete data from the database unintentionally. It could also slow the website down since Tripal will try to look for un-needed data in the database. Most of the queries I found try to pull data from the analysis and organism tables.

Additional info

To fix this, we'll need to go through every module we use and make sure the module_name.fields.inc file defines the appropriate instance settings. In particular, we need to look at the 'chado_column', 'base_table' and 'chado_table' keys in HOOK_bundle_instances_info().

@jwest60 @noahcaldwell7 let's get together and discuss this since it's a big change and we'll need to work together to get all the fields fixed.

[almasaeed2010]

List of modules to fix:

• [x] tripal_alchemist (Joe, no fields)
• [x] tripal_analysis_expression (Noah)
• [x] tripal_analysis_go
• [x] tripal_analysis_kegg
• [x] tripal_blast_jbrowse (Joe, no fields)
• [x] tripal_cmap_loader (Joe)
• [x] tripal_curator (Joe, no fields)
• [x] tripal_cv_xray (Joe)
• [x] tripal_elasticsearch (abdullah)
• [x] tripal_feature_pub (Joe)
• [x] tripal_galaxy (Noah, no fields.inc file)
• [x] tripal_jbrowse_instance (Joe)
• [x] tripal_jbrowse_link (Joe, no fields)
• [x] tripal_jobs_regulator (Joe, no fields)
• [x] tripal_manage_analyses (Joe)
• [x] tripal_manage_menus (Joe, no fields)
• [x] tripal_map (Joe)
• [x] tripal_organism_panes (Joe, no fields)
• [x] tripal_quick_fasta (Joe, no fields)
• [x] tripal_rshiny (Joe, no fields)
• [x] tripal_search_link (Joe, no fields)
• [x] tripal_ssr (Joe) (abdullah - deployed)
• [x] tripal_transcriptome (Joe, no fields)
• [x] tripal_transcriptomes_table (Joe, no fields)
• [x] tripal_vis_expression (Joe, no fields)

[almasaeed2010]

Great work @jwest60 and @noahcaldwell7

All fixed and successfully deployed 👍