statonlab / hardwoods_site

Hardwoods Genomics bugs, data loading, and general issues
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Results cannot be displayed for BLAST #602

Closed mestato closed 4 years ago

mestato commented 4 years ago

Bug description

Ran blastn with a random poplar nucleotide sequence and the Castanea mollissima scaffolds database. (Laura Georgi, the reporter of the bug, works on chestnut). Can confirm same error:

Screen Shot 2020-09-14 at 5 46 27 PM

Location

Screenshots

Additional info

almasaeed2010 commented 4 years ago

Looks like we just needed to install blast cli tools on the server. Should work now.

almasaeed2010 commented 4 years ago

Turns out we also needed to configure the /tmp directory for apache and install additional php libraries (php-gd and php-imagick) but I tested it and it now works as expected.

Feel free to reopen if it doesn't work for you.