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statonlab / tripal_manage_analyses

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obi__organism_linker field assumes abbreviation and common name both exist #107

Closed dsenalik closed 3 years ago

dsenalik commented 3 years ago

I don't have the abbreviation and common_name columns populated for all organisms in my chado.organism table.

The obi__organism_linker tripal field therefore only displays a pair of parentheses, although the link works.

I am providing pull request #108 to use genus and species when these are not present, or call the chado_get_organism_scientific_name() function if it is available to get the full name including infraspecific nomenclature.

almasaeed2010 commented 3 years ago

Merged. Thanks again for the fix!