josef-pkt
commented
8 years ago We should still finish up 0.7 release notes, given that we keep them separate from 0.8
$ git log --merges 50b474fda484ea4614185ab51f1ae3ed9c9296e8..dfd2b4ec8f2cffa65c
44675ab25bba67de801058 | grep 'ENH\|MAINT\|BUG\|TST\|REF\|CLN\|DOC\|BLD\|DEV\|C
OMPAT\|Merge pull\|Cox'
Merge pull request #2612 from ChadFulton/bug-2611
BUG: Statespace: Test failures on certain Travis builds.
Merge pull request #2574 from hlin117/monotone_fn_inverter_docstring
DOC: monotone_fn_inverter: fixed docstring
Merge pull request #2590 from josef-pkt/tsa_predict_end
BUG: ARMA predict better input handling
Merge pull request #2603 from joestox/strata_predict
BUG surv object being overwritten
Merge pull request #2565 from waynenilsen/root-logger-debug-call
REF/CLN SimpleTable removed root logger calls
Merge pull request #2562 from kiyoto/GH2272-dynamic_var_docs
DOC Update DynamicVAR docs
Merge pull request #2555 from ChadFulton/fix-2554
BUG: Statespace: Error with dynamic predict over a subsample when time-varyi
ng matrices are present.
Merge pull request #2540 from josef-pkt/glar_history_add
ENH: Glar add history, convergence criteria closes #2269 closes #181
Merge pull request #2539 from ChadFulton/ss-rel-fix
DOC: Fixed typo (formulating -> form)
Merge pull request #2552 from kiyoto/plot_acf-GH2336
BUG: Handle alpha=None case for plot_acf
Merge pull request #2556 from TomAugspurger/sm-readme
DOC: add section for github docs [skip-ci]
Merge pull request #2546 from ChadFulton/ss-cleanup
BUG: SARIMAX predict breaks when simple_differencing=True closes #2545
Merge pull request #2543 from kiyoto/summary_table_GH1492
REF: Split the conf. int. cells for summary method
Merge pull request #2524 from ChadFulton/ss-coverage
TST: Add coverage to statespace package
Merge pull request #2532 from jseabold/fix-notebook
DOC: Fix dataset URL for notebook closes #2320
Merge pull request #2365 from saketkc/fix_regplot
ENH/BUG: Allow 1 column exog plots
Merge pull request #2523 from jseabold/silence-tests
TST: Silence warnings
Merge pull request #2529 from jseabold/update-tsa-examples
DOC: Update tsa example refactoring victims.
Merge pull request #2526 from kiyoto/stop-arima-exog-names-expand
BUG: prevent _make_arma_names from adding exog_names when already present
Merge pull request #2522 from jseabold/attach-mle-retvals
ENH: Attached mle_retvals to ARIMA. Closes #2479.
Merge pull request #2520 from jseabold/fix-2519
REF: summary_col Avoid pandas SettingWithCopyWarning. Closes #2519.
Merge pull request #2515 from ChadFulton/ss-cs-chol
BUG/REF: State space: Cholesky factorization with complex step derivatives
Merge pull request #2513 from ChadFulton/ss-doc
DOC: State space: release notes and documentation.
Merge pull request #2517 from ChadFulton/ss-fix-reg
REF: Fix regressions introduced in #2473.
Merge pull request #2525 from jseabold/add-citation
DOC: Add citation to documentation.
Merge pull request #2512 from JanSchulz/GH2510+2511
BUG: plot_corr use None check Gh2510+2511
Merge pull request #2518 from kiyoto/ztest_ind_docstring
DOC: fix CompareMeans.ztest_ind docstring [skip-ci]
Merge pull request #2504 from kiyoto/tsa-arima-typo
DOC: arry -> array in ARIMA
Merge pull request #2363 from kshedden/lme-profile-beta2
REF/ENH: major upgrades to MixedLM including variance components
Merge pull request #2289 from kshedden/gee_stationary
REF/ENH GEE stationary covariance structure
Merge pull request #2307 from kshedden/gee-ordinal
ENH/BUG Various GEE improvements
Merge pull request #2473 from ChadFulton/ss-decouple
REF: Decouple state space / filter from MLE
Merge pull request #2496 from kiyoto/docs-log-inverse_deriv
DOC links.py fix docstrings
Merge pull request #2356 from ChadFulton/ss-info-mat
ENH: Statespace - add OIM and OPG covariance matrices
Merge pull request #2497 from josef-pkt/fix_gmm
BUG gmm cov_params
Merge pull request #2413 from chebee7i/regression-doc
DOC documentation update for regression.
Merge pull request #2461 from ChadFulton/std-resid
COMPAT/TST: Statespace: Standardized residuals: fix compatibility with Scipy
0.11, add tests
Merge pull request #2489 from ChadFulton/ss-results
ENH: Make SARIMAXResults.specification a Bunch
Merge pull request #2488 from ChadFulton/ss-init
ENH: Add initialization via keyword args to init.
Merge pull request #2498 from josef-pkt/arima_forecast_rebased_2457
BUG Arima forecast rebased
Merge pull request #2490 from josef-pkt/numpy_deprecation_2480
MAINT/REF: fix numpy deprecation warnings closes #2480
Merge pull request #2487 from josef-pkt/bug_glm_negbin_2037
Merge pull request #2486 from josef-pkt/bug_quantreg_2377
BUG quantreg zero residuals
Merge pull request #2478 from josef-pkt/spelling_stats
BUG/REF stats: fix spelling of names in function names
Merge pull request #2470 from josef-pkt/arima_exog_predict_2128_rebased
Merge pull request #2477 from josef-pkt/BUG_OLS_fvalue_noconstant_2444
BUG: OLS set fvalue to nan if implicit constant and robust cov
Merge pull request #2471 from josef-pkt/mosaic_cornercase_rebased
Merge pull request #2468 from josef-pkt/tst_glm_summary
TST smoke test for GLM summary and summary2
Merge pull request #2375 from josef-pkt/BUG_pickle_formula
BUG: pickling with formulas - use original dataframe
Merge pull request #2412 from josef-pkt/x13_py3
MAINT: tsa.x13 python 3 compat
Merge pull request #2426 from rgommers/stats-deprecations
MAINT: remove use of deprecated scipy.stats.ss helper function.
Merge pull request #2410 from jerry-dumblauskas/master
DOC: example code needs fully qualified path to run [ci skip]
Merge pull request #2390 from lemieuxl/mixedlm_fix_DeprecationWarning
REF/MAINT: mixedlm use integer division
Merge pull request #2317 from josef-pkt/bug_count_startparams
Merge pull request #2337 from josef-pkt/TST_fix_nan_svd
TST fix test to avoid nans in exog if missing are ignored closes #2308
Merge pull request #2333 from saketkc/doc_fixes
DOC: Fix rst math for MixedLinear
Merge pull request #2335 from josef-pkt/bug_mathjax_notebook
MAINT: update URL for mathjax om notebook_output_template.py
Merge pull request #2334 from DonBeo/test_robustcov2
TST: minor test tolerance increase
Merge pull request #2285 from ChadFulton/ss-release-note
DOC: Add state space and SARIMAX release notes.
Merge pull request #2284 from ChadFulton/mlemodel-param-names
BUG: Fix ad-hoc models failing with no param_names
Merge pull request #2283 from ChadFulton/sarimax-exog-names
BUG: Fixed SARIMAX exog names when exog is pandas.
Merge pull request #2313 from bashtage/doc-cleanup
DOC/CLN: Fix small errors in doc strings closes #2281
Merge pull request #2329 from saketkc/fix_var-2271
BUG: Check trend type in VAR models
Merge pull request #2277 from ChadFulton/gh-2267
TST/BUG: Fix scaling issue on 32 bit systems in test.
Merge pull request #2279 from josef-pkt/fix_version_pep440
MAINT: change dev version number for pep440
Merge pull request #2278 from josef-pkt/disable_webuse_test
TST disable test_webuse again
Merge pull request #2275 from josef-pkt/bug_var_irf_trend
BUG: VAR irf cov_alpha, fix if trend or no constant
Merge pull request #2268 from gliptak/patch-1
BUG/MAINT sandbox GARCH Correct import and remove print statement
Merge pull request #2261 from bashtage/remove-unique1d
MAINT: Remove unique1d
Merge pull request #2260 from bashtage/fix-pandas-warnings
MAINT: Remove pandas and numpy warnings
Merge pull request #2247 from saketkc/fix_urllib
TST: Check internet availability before running tests
Merge pull request #2251 from bashtage/doc-ols
DOC: Improve OLS.fit docstring
Merge pull request #2259 from josef-pkt/sarimax_initkeys
ENH: fix/add SARIMAX _init_keys and get_init_kwds
Merge pull request #2258 from josef-pkt/fix_sarimax_wald_tests
BUG: fix t_test wald_test requirements
Merge pull request #2254 from ChadFulton/gh-2253
BUG: state space Cython indices error closes #2253
Merge pull request #2250 from ChadFulton/statespace
ENH: State space models
Merge pull request #2245 from bashtage/optional-mpl-pca
TST: Make Matplotlib optional
Merge pull request #2246 from bashtage/travis-no-mpl-config
MAINT/TST: Modify Travis to have configuration without matplotlib
Merge pull request #2249 from josef-pkt/fix-data-design_info_rebased
ENH/REF formula enhancements, closes #2173
Merge pull request #2242 from josef-pkt/dtype_outlier_influence
BUG dtype in outlier influence
Merge pull request #2241 from josef-pkt/TST_disable_testwebuse
TST disable test_webuse for now
Merge pull request #2213 from dmsul/groupsum-memerr
BUG: make `group_sums` more mem efficient. Closes #2169.
Merge pull request #2151 from josef-pkt/prediction_interval
ENH: Prediction interval
Merge pull request #2238 from bashtage/pca-api
Merge pull request #2132 from josef-pkt/wald_anova
ENH: add wald_test_terms
Merge pull request #2234 from josef-pkt/tst_webuse
TST: webuse test try http location see #2233
Merge pull request #2229 from kshedden/glm-added-variable-bug
BUG/REF Regression plots issues including #2227
Merge pull request #2228 from bashtage/doc-robust-stats
DOC: Add robust skewness and kurtosis to docs
Merge pull request #2230 from kshedden/predict-test-bug
TST: Check for matplotlib in tests (partially addresses #2227)
Merge pull request #2219 from neilsummers/detrend-bug@2214
BUG detrend axis closes #2214
Merge pull request #2226 from josef-pkt/fix_webuse_py3_rebased
Merge pull request #2225 from bashtage/pca-announce
DOC: Added announcement for PCA
Merge pull request #2223 from kshedden/glm-check-link
BUG: GLM link warnings
Merge pull request #2188 from kshedden/gee_equivalence_from_labels
ENH GEE equivalence class covariance structure enhancements
Merge pull request #2222 from josef-pkt/glm_exposure_int
REF/BUG: add _get_init_kwds to GLM to handle exposure
Merge pull request #2172 from kshedden/predict-functional
ENH: Prediction for functional regression, in sandbox for now
Merge pull request #2212 from kshedden/glm-family-warn-bound
ENH: Emit warning in GLM if link does not respect family domain (#2208)
Merge pull request #2204 from kshedden/glm-noncanonical-tests
TST: Test GLM IRLS vs Newton using all links
Merge pull request #2211 from josef-pkt/travis_slowtests
TST: run also slow tests on TravisCI
Merge pull request #2210 from josef-pkt/bug_ttest
BUG: t_test, wald_test with only cov_params_default
Merge pull request #2199 from jseabold/partial-func-fix
REF: Don't use partial funcs in generators for nose. Closes #2121.
Merge pull request #2186 from bashtage/travis-update-scipy
TST: Update travis to newer packages
Merge pull request #2090 from kshedden/gee-weights5
ENH: Add weights to GEE
Merge pull request #2180 from kshedden/phreg-2178
BUG Initial commit to fix issue closes #2178
Merge pull request #1961 from kshedden/glm_like_score_hess
ENH: Add gradient-based optimization for fitting GLM's, add analytical gradi
ents
Merge pull request #2196 from jseabold/padarn-tests
TST: KDEUnvariate tests.
Merge pull request #2195 from jseabold/mosaicplot-fix
ENH: Fail gracefully if no index given for DataFrame in MosaicPlot
Merge pull request #2187 from bashtage/improve-python-compat
CLN: Explicit import for compatibility
Merge pull request #2170 from dmsul/fix-clusgroup-dim
BUG: clustered cov fails when groups are 2d vector. Closes #2168
Merge pull request #2004 from bashtage/pca-class
ENH: Make PCA a class and add features
Merge pull request #2158 from kshedden/gee-2156
REF: GEE margins, improve test coverage, closes #2165 see also #2156
ENH: dotplot improve labels, formatting, closes #2086
Merge pull request #2143 from cdeil/statsmodels-chi2-fitting
DOC: Statsmodels chi2 fitting
Merge pull request #2137 from josef-pkt/cov_type_fixedscale
ENH: add cov_type fixed_scale to linear model closes #2142
Merge pull request #2166 from josef-pkt/glm-added-variable-plot_2018_rebased
Merge pull request #2162 from kshedden/gee-eqclass-covstruct
Merge pull request #2125 from kshedden/lme-profile-diag-bug
Merge pull request #2160 from argriffing/whats-up-with-calc-lwork
MAINT: remove calc_lwork closes #2159
Merge pull request #2135 from jseabold/relax-mlogit-check
REF: More general checking of MRO for Multinomial.
Merge pull request #2119 from jseabold/fix-2118
BUG: Optimizers broken for full_output = 0.
Merge pull request #2115 from jseabold/update-mixedlm-notebook
Merge pull request #2111 from kshedden/mixed_profile
BUG: Fix MixedLM profile. Closes #2102
Merge pull request #2053 from kshedden/categorical-gee-api
ENH: Add NominalGEE and OrdinalGEE to api
Merge pull request #2105 from jseabold/fix-1798
BUG: Avoid returning nans in lowess.
Merge pull request #691 from vincentarelbundock/r2py
DEV: R2py refactor
Merge pull request #2026 from hmgaudecker/master
DEV: OS X binstar recipe.
Merge pull request #2067 from josef-pkt/generalized_irf_fevd
ENH: allow generalized irf fevd calculations
Merge pull request #2066 from tshauck/fix_np_ones
BUG: Add missing namespace. Closes #2065.
Merge pull request #2103 from jseabold/release-notes-0.7
DOC: Add 0.7.x release notes stub.
Merge pull request #2088 from jseabold/cleanup-tools
MAINT: Remove unneeded compatibility file. Cleanup tools.
Merge pull request #2089 from jseabold/fix-slogdet
BUG: Fix pos. def check in logdet
Merge pull request #2097 from jseabold/fix-mixedlm
BUG: Make sure RE names are properly handled in MixedLM.
Merge pull request #2093 from jseabold/add-constant-check
ENH: Add user control over what happens if a constant is already present.
Merge pull request #2084 from jseabold/fix-2083
BUG: Correct issue if patsy handles missing. Closes #2083.
Merge pull request #2082 from jseabold/cleanup-rsync
MAINT: Remove redundant rsync flags
Merge pull request #2081 from jseabold/docs-fix
DOC: Add one line docs summary
Merge pull request #2060 from jseabold/fix-windows-builds
MAINT: Update folders for build bot
Merge pull request #2057 from jseabold/fix-arma-failure-debian
TST: Fix test for debian failure.
Merge pull request #2048 from jseabold/mnlogit-factor
ENH: MNLogit strings/factor
bashtage
jbrockmendel
@josef-pkt Probably closeable since near 0.8rc