stefpeschel / NetCoMi

Network construction, analysis, and comparison for microbial compositional data
GNU General Public License v3.0
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How to easily understand the GCM heatmap #125

Open Ivy-ops opened 1 month ago

Ivy-ops commented 1 month ago

Thank you for the excellent package! When running the code below, it generates a heatmap. You recommend checking ?calcGCD, but it can still be challenging for new users to understand. Do you have any suggestions for explaining the heatmap in the demo data analysis? Your assistance would be greatly appreciated! props_spring <- netAnalyze(net_spring, centrLCC = TRUE, clustMethod = "cluster_fast_greedy", hubPar = "eigenvector", weightDeg = FALSE, normDeg = FALSE)