Compare two conditions in one network

[linux51]

Good morning, Thank you for the good package. I have phyloseq object of control and disease group. I did try separate control group and disease group then construct the network. But i would like to see the dynamic changes from control to disease in one network. Would you please provide me some guideline?

[stefpeschel]

Hey, you can follow this tutorial on cross-domain networks and use your disease and control data sets instead of the two domains. The tutorial explains, how two cross-domain networks are compared. Since you want to construct a single network, you can skip the step where the data is split into two groups. Best regards, Stefanie

[linux51]

Thank you