how to reports contamination with the target sequence is longer than 20kb

steineggerlab / conterminator

Detection of incorrectly labeled sequences across kingdoms

GNU General Public License v3.0

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how to reports contamination with the target sequence is longer than 20kb #16

Open lindechun opened 3 years ago

lindechun commented 3 years ago

What can I do if I want to identify a contaminated sequence with a target sequence greater than 20kb? Setting parameters of ./conterminator or modifying source code when compile it?

martin-steinegger commented 1 year ago

I added a parameter to control the length --contamination-len