I really like the approach taken in conterminator and would like to apply it in my dataset, which is the output of diamond deepclust. However, I am unsure whether the diamond deepclust be used as an input to conterminator. Could you let me know whether this could be done?
The example output of diamond deepclust on the example sequences, i.e. diamond deepclust -d example/prots.fas -o dmnd.deepclust.out --approx-id 30, is as follows.
Dear @martin-steinegger ,
I really like the approach taken in
conterminatorand would like to apply it in my dataset, which is the output ofdiamond deepclust. However, I am unsure whether thediamond deepclustbe used as an input toconterminator. Could you let me know whether this could be done?The example output of
diamond deepcluston the example sequences, i.e.diamond deepclust -d example/prots.fas -o dmnd.deepclust.out --approx-id 30, is as follows.(@RocesV , maybe this question could be interesting for you too.)
Best regards, Sodai