search

steineggerlab / foldseek

Foldseek enables fast and sensitive comparisons of large structure sets.
https://foldseek.com
GNU General Public License v3.0
695 stars 92 forks source link

difference between Alphafold/UniProt50 and Alphafold/UniProt50-minimal #235

Open dadush1 opened 5 months ago

dadush1 commented 5 months ago

I would like to know what is the difference between Alphafold/UniProt50 and Alphafold/UniProt50-minimal? I would like understand the difference and how it affects in terms of usage and size required on disc?

Thanks in advance

martin-steinegger commented 4 months ago

AlphaFold/UniProt50-minimal provides only representative structures and lacks C-alpha atom information, whereas the AlphaFold/UniProt50 database supports cluster searches, enabling retrieval of all AFDB (AlphaFold Database) members.