Aligned 3Di alphabet sequence MSA Fasta file generation

steineggerlab / foldseek

Foldseek enables fast and sensitive comparisons of large structure sets.

https://foldseek.com

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Aligned 3Di alphabet sequence MSA Fasta file generation #248

Open rakeshr10 opened 4 months ago

rakeshr10 commented 4 months ago

Hi,

I want to know if foldseek can output multiple structural alignment generated using 3Di as aligned 3Di alphabet sequences in Fasta format and not aligned amino acid sequences of the proteins.

Regards Rakesh

kchennen commented 1 month ago