Closed Changwanseo closed 1 year ago
Current version has a flawed nucleotide sequence extraction process in which all lowercase bases from the backward strands are converted into the alphabet X
.
Commit fe699d1 will not only fix this issue, but also improve the speed of the reverse complement sequence computation in general. I will soon make a new release including this update.
Call ucg file with "profile" ufcg profile -i ./tmp 0o ./101_ufcg_profile -t 32 -v --developer --force 1
Align with ufcg ufcg align -i ./101_ufcg_profile -o ./201_ufcg_align_nuc -l acc -a nucleotide -n align -l strain -t 24