Open Truongphi20 opened 11 months ago
Seems like the error was occurred by the concurrent change in the contents of /tmp
directory.
Generating a custom temporary directory (e.g. /tmp/ufcg
) and providing the path via -w
option will prevent such behavior, such as:
mkdir -p /tmp/ufcg/
ufcg profile -i <input> -o <output> -w /tmp/ufcg/
Please give it a try and let me know if the issue persists.
Based on the tutorial, I tried to command with my sample and got the above error, This is my command:
I have 7 samples, the first 6 samples' runnings are done successfully, but cause an error on the 7th, I suspect the error was caused by missing the input metadata field of the 7th sample. I only filled the
filename
,taxon_name
,strain_name
, andtaxonomy
filed of the 7th sample and missing theaccession
, andncbi_name
fields (because they are unknown information). I really need some help. Thanks.