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steineggerlab / ufcg

UFCG: Universal Fungal Core Genes
https://ufcg.steineggerlab.com
GNU General Public License v3.0
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ERROR! Tree file of gene CMD1 not found : trees2/aligned_COX2_pro.zZ.fasta.treefile #26

Closed Burythelightwithin closed 4 months ago

Burythelightwithin commented 4 months ago

I got same error issue with #21. But in my case, I checked CMD1_pro.zZ.fasta file, but there was no any different sequences (every sequences were same).

Though I got 1 warning message as...

WARN |: Less than 4 species have 'COB'. This gene will be excluded. COB had no problem and its nwk file is successfully generated.

I also tried --fasttree STR and --raxml STR option, but I got same result. What other option can I adjust?

Burythelightwithin commented 4 months ago

I solved the problem. I added option as --fasttree STR, but actually, the right command was -p fasttree.