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stemangiola
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cellsig
GNU General Public License v3.0
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Signature matrix
#84
malonzm1
opened
3 months ago
0
Kamran
#83
stemangiola
closed
1 year ago
1
Kamran
#82
stemangiola
closed
1 year ago
0
merge master
#81
stemangiola
closed
1 year ago
0
Kamran
#80
stemangiola
closed
1 year ago
0
Fix checks
#79
stemangiola
closed
1 year ago
0
Tasks for revising the manuscript
#78
Kamran-Khan96
opened
1 year ago
0
function for plotting gene abundance
#77
stemangiola
opened
1 year ago
1
Close the resolved or obsolete
#76
stemangiola
closed
1 year ago
1
Misterious changes
#75
stemangiola
opened
1 year ago
0
Directory structure
#74
stemangiola
opened
1 year ago
0
Characterise copy number variation from epithelial / luminal cells
#73
XpelC
opened
1 year ago
0
what does justify dataset difference
#72
stemangiola
opened
1 year ago
4
Compare prostate cancer features with unspecific B1000 data
#71
XpelC
opened
2 years ago
0
Define the batch
#70
XpelC
opened
2 years ago
0
Defining the clusters
#69
XpelC
opened
2 years ago
78
For each dataset, we want to test whether integration is needed across samples, or it is NOT needed.
#68
XpelC
closed
2 years ago
3
Try to cluster the datasets with 10 different resolution
#67
XpelC
opened
2 years ago
8
Implement shiny app in the WEHI servers
#66
stemangiola
closed
1 year ago
15
Figures and other files for the manuscript
#65
Kamran-Khan96
closed
1 year ago
15
Harmonise the datasets
#64
stemangiola
opened
2 years ago
12
Goals for final figures
#63
Kamran-Khan96
closed
1 year ago
2
Cmdstanr
#62
Kamran-Khan96
closed
2 years ago
0
Cross-validation_without_tree
#61
Kamran-Khan96
closed
1 year ago
1
First explorative tasks
#60
stemangiola
closed
2 years ago
3
Figure generation
#59
Kamran-Khan96
closed
1 year ago
1
Dev
#58
Kamran-Khan96
closed
2 years ago
2
Dev
#57
Kamran-Khan96
closed
2 years ago
0
user interface
#56
stemangiola
closed
1 year ago
5
Kamran
#55
stemangiola
closed
2 years ago
0
Run cellsig without needing tree input
#54
Kamran-Khan96
closed
2 years ago
0
get_new_functions
#53
Kamran-Khan96
closed
2 years ago
0
Help polishing old datasets
#52
stemangiola
closed
2 years ago
0
Help polishing old datasets
#51
stemangiola
closed
2 years ago
0
Kamran
#50
stemangiola
closed
2 years ago
0
polish cellsigDB (the minimum standard)
#49
stemangiola
closed
1 year ago
3
Vignette for Bayes
#48
stemangiola
closed
1 year ago
16
small changes
#47
stemangiola
closed
2 years ago
0
Benchmark database crossvalidation
#46
stemangiola
closed
2 years ago
0
After the signature generation, even after using non-hierarchical approach, the generated signatures show a hierarchical arrangement of the cells.
#45
Kamran-Khan96
closed
2 years ago
1
Jian
#44
stemangiola
closed
2 years ago
0
Back to unique assoc
#43
stemangiola
closed
2 years ago
0
update create input
#42
stemangiola
closed
2 years ago
0
Measure the difference between variability of Bayes and naive methods.
#41
stemangiola
opened
2 years ago
0
Use/compare new method for signature selection
#40
stemangiola
closed
1 year ago
10
Mixed effects
#39
stemangiola
closed
2 years ago
0
Signature benchmark
#38
stemangiola
closed
1 year ago
5
Optimise signature extraction memory consumption.
#37
stemangiola
closed
1 year ago
3
Evaluation plots of the effect of Bayesian estimated gene expression distribution vs empirical gene expression from samples of various sizes
#36
jianwu1
closed
1 year ago
8
Mixed effects
#35
stemangiola
closed
2 years ago
0
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