Clarification of getting back/disabling the viewing of sce as tibble?

[denvercal1234GitHub]

Hi there,

Thanks for developing a very useful package.

Would you mind clarifying how we can disabling ("getting back") the sce class of the sce object?

After I installed the package, immediately my sce object becomes a tibble object without me setting or running any function to specify that, which was a bit unexpected.

[stemangiola]

with

options("restore_SingleCellExperiment_show" = TRUE)

You can go back to the original visualisation

immediately my sce object becomes a tibble object

The SCE object is never touched, just its representation changes. Have a look here

https://tidyomics.github.io/tidyomicsWorkshopBioc2023/articles/tidyGenomicsTranscriptomics.html

@william-hutchison could we add the toggle example in our workshop

https://tidyomics.github.io/tidyomicsWorkshopBioc2023/articles/tidyGenomicsTranscriptomics.html

to the tidySingleCellExperiment README and Vignette?

[william-hutchison]

Hello @stemangiola and @denvercal1234GitHub. Sure, I think including this information is a great idea. I will add it now