Trimmed_fastq output directory not being populated?

stenglein-lab / tick_surveillance

Bioinformatics pipeline for analysis of amplicon sequencing of tick-associated microbes

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Trimmed_fastq output directory not being populated? #97

Closed stenglein-lab closed 1 month ago

stenglein-lab commented 1 month ago

I am not seeing this behavior but I switched the publish mode from symbolic links to hard links in case that's the issue on a different computing environment (sym links not allowed?) in e53a90d