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stephenshank / the_observable_galaxy

Integrating the ObservableHQ notebook platform with the Galaxy project
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SC2 Variant Calling Observable integration #10

Open jzehr opened 1 year ago

jzehr commented 1 year ago

Here is:

history with data: https://galaxy.hyphy.org/u/jzehr/h/variation-reporting-data WF: https://galaxy.hyphy.org/u/jzehr/w/covid-19-variation-analysis-reporting-imported-from-uploaded-file

The goal is to go from a collection of SC2 VCFs, combine them, and then visualize them with Observable

stephenshank commented 1 year ago

Nice work of @jzehr here: https://docs.google.com/spreadsheets/d/1_Cn0Uktf93sMy8x6qui84lJBgp11jqdE_8pHFLSOb_4/edit#gid=0

You can copy the accessions out of Google Sheets and paste them directly into Galaxy in < 1 minute, let me know if you'd like a demo.