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stephenslab / dsc-log-fold-change

dsc to compare approaches to estimating/testing log-fold-change from counts
https://stephenslab.github.io/dsc-log-fold-change/
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Update CI (again) #15

Closed jdblischak closed 5 years ago

jdblischak commented 5 years ago

A follow-up to #14. Using conda install appears to be more robust than conda env create on both CircleCI and Travis. The main downside is that now we have to maintain the list of dependencies in environment.yaml and in requirements/. I also added some installation instructions.

jdblischak commented 5 years ago

The conda installation step worked on both CircleCI and Travis.

The CircleCI keeps failing during the DSC step. The exact job varies, but it always failed because it gets killed (example). I assume this is because it uses too much memory. One option to fix this would be to have DSC run fewer steps.