willwerscheid commented 5 years ago

Update optimization functions (typically 3-5x faster now). Add LFSR as possible output. Add ebnm_normal function to interface. Add fix_a parameter so that variance of normal can be fixed independently. Add a bunch of new tests.

willwerscheid commented 5 years ago

Closes #10 . Closes #9 .

codecov-io commented 5 years ago

Codecov Report

Merging #14 into master will increase coverage by 11.4%. The diff coverage is 74.56%.

@@            Coverage Diff            @@
##           master     #14      +/-   ##
=========================================
+ Coverage   51.69%   63.1%   +11.4%     
=========================================
  Files          13      14       +1     
  Lines         325     458     +133     
=========================================
+ Hits          168     289     +121     
- Misses        157     169      +12

Impacted Files	Coverage Δ
R/summary_results_laplace.R	`87.5% <ø> (ø)`
R/output.R	`100% <100%> (+33.33%)`	:arrow_up:
R/post_sampler_point_normal.R	`100% <100%> (ø)`	:arrow_up:
R/mle_pn_special_cases.R	`50% <50%> (ø)`
R/ebnm.R	`53.57% <53.57%> (ø)`
R/ebnm_point_normal.R	`71.69% <59.45%> (-17.59%)`	:arrow_down:
R/ebnm_point_laplace.R	`88% <76.92%> (+88%)`	:arrow_up:
R/mle_point_normal.R	`80.43% <82.22%> (+13.76%)`	:arrow_up:
R/loglik_point_normal.R	`92.3% <85.71%> (+0.64%)`	:arrow_up:
R/summary_results_point_normal.R	`96.77% <96.77%> (ø)`
... and 7 more

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stephenslab / ebnm

Rewrite point_normal functions #14

Codecov Report