error in `flash` with `ebnm_pn' 4 out of 20 runs have this problem.

NKweiwang commented 6 years ago

I tried flash with ebnm_pn for GTEx zscore data for missing value imputation (10 fold OCV). 4 out of 20 runs have the following problems.


  L-BFGS-B needs finite values of 'fn'
In addition: There were 30 warnings (use warnings() to see them)
Error in mle_normal_logscale_grad(x, s) : 
  optim failed to converge; debug information saved to temp_debug.RDS  ```

please take a look at the debug.rds data.

Thanks a lot.

[temp_debug.RDS.zip](https://github.com/stephenslab/ebnm/files/1656865/temp_debug.RDS.zip)

NKweiwang commented 6 years ago

the temp_debug.RDS file doesn't seem readable. I just re-upload it again. This is the same data file.

temp_debug.RDS.zip

stephens999 commented 6 years ago

problem was s=0 for some s. Fixed in ba1c03d744be327523439cec9ea43b6391f7fa73

stephenslab / ebnm

error in `flash` with `ebnm_pn' 4 out of 20 runs have this problem. #2