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stephenslab / ipynb-website

Simple data science website using Jupyter notebooks.
https://tinyurl.com/yb7mal2m
MIT License
66 stars 29 forks source link

ERROR: [0b756f00-9799-4b2d-a177-5522a1d781bb]: [update-hp]: [(id=04f9e17fd8961be6, index=3)]: Failed to execute python .sos/update-hp_3_2a91c17b.py #15

Closed ben-sandham closed 3 years ago

ben-sandham commented 4 years ago

`INFO: update-hp (index=4) is completed. ERROR: [0b756f00-9799-4b2d-a177-5522a1d781bb]: [update-hp]: [(id=04f9e17fd8961be6, index=3)]: Failed to execute python .sos/update-hp_3_2a91c17b.py exitcode=1, workdir=C:\Users\bsand\Documents\Data_Science\ipynb-website

[update-hp + update-nb + update-wf + upda]: 5 pending steps: Notebook to HTML converter, Pipeline to HTML converter, TOC Javascript updater, Search Javescript updater, Obsolete files remover [default]: Exits with 1 pending step (default_4)`

ben-sandham commented 4 years ago

Hi, I am curious if you have any insight regarding the error I encountered on Step 7 of the Quick Start guide for the ipynb-website repository.

gaow commented 4 years ago

@benjamin-sandham what happen if you run 

python .sos/update-hp_3_2a91c17b.py

under folder

C:\Users\bsand\Documents\Data_Science\ipynb-website

as prompted in the error message above? Although in principle it should work, we haven't tested it for Windows. But the message from that command should tell us more. Thanks!

ben-sandham commented 4 years ago

$ python .sos/update-hp_3_2a91c17b.py Traceback (most recent call last): File ".sos/update-hp_3_2a91c17b.py", line 1274, in <module> get_sha1_files([('protected\\_index.ipynb', 'docs\\protected.html')], [], {'protected': 'protect_folder', 'protected\\protected_page.ipynb': 'protect_page'}, write = True) File ".sos/update-hp_3_2a91c17b.py", line 1205, in get_sha1_files for fn, p in zip(index_files + notebook_files, password) if p] File ".sos/update-hp_3_2a91c17b.py", line 1205, in <listcomp> for fn, p in zip(index_files + notebook_files, password) if p] File ".sos/update-hp_3_2a91c17b.py", line 1191, in protect_page content = open(page).readlines() FileNotFoundError: [Errno 2] No such file or directory: 'docs\\protected.html' @gaow running that command produced a file not found error. I appreciate your assistance, I have not worked with a JNB framework like this.

gaow commented 3 years ago

We have now released a version executed via docker, which should help with this issue:

https://github.com/stephenslab/ipynb-website/releases/tag/v0.9.8