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stephenslab
/
mashr
An R package for multivariate adaptive shrinkage.
https://stephenslab.github.io/mashr
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error: inv_sympd(): matrix is singular or not positive definite
#79
Young-Sook
closed
4 years ago
12
Fixed an ED code bug and reorganize C codes into one header
#78
gaow
closed
4 years ago
2
cov_pca function reports error if subset is of length 1
#77
DongyueXie
opened
4 years ago
2
Avoid segfault in proj_EM if logging is disabled
#76
jthiltges
closed
4 years ago
2
Error in Fitting mash model
#75
ravimural
closed
4 years ago
8
Provide way to pass opt control params along in mash_1by1
#74
willwerscheid
opened
4 years ago
0
trouble installing mashr
#73
annacuomo
closed
4 years ago
4
Performance benchmarking?
#72
t-silvers
closed
3 years ago
1
How to control number of CPUs in mash
#71
kaz-ishigaki
opened
4 years ago
12
C++ plugin cannot handle large input
#70
gaow
opened
4 years ago
9
Complaint about matrix size
#69
QinqinHuang
closed
4 years ago
8
Understanding the "posterior weights" in mash output
#68
lukeholman
opened
5 years ago
3
ERROR: matrix is singular
#67
katiaplopes
closed
3 years ago
4
Fix posterior sampling matrix when A has one row; Add unit test
#66
zouyuxin
closed
5 years ago
0
Input argument "A" with only one row sometimes results in an error
#65
pcarbo
opened
5 years ago
0
obtaining both terms going into the local false sign rate calculation
#64
hillarykoch
opened
5 years ago
2
Commoncov inversed
#63
gaow
closed
5 years ago
0
Data dimension issue with usepointmass = FALSE
#62
vplagnol
opened
5 years ago
4
Equal effects components
#61
ardecasien
opened
5 years ago
8
unable to install mashr on windows
#60
lzhangUT
closed
3 years ago
6
Allow the input null correlation be 3 dimensional array in R version
#59
zouyuxin
closed
5 years ago
0
Milestone 1.0 features to freeze
#58
gaow
opened
5 years ago
2
Updated README to reflect no longer using ED installation
#57
surbut
closed
5 years ago
1
Correct README
#56
surbut
closed
5 years ago
0
Update citation("mashr")
#55
pcarbo
opened
5 years ago
0
Get Travis CI & Appveyor working again
#54
pcarbo
closed
5 years ago
6
Update installation instructions in README
#53
pcarbo
opened
5 years ago
0
Makevars (and Makevars.win) should be portable
#52
pcarbo
closed
5 years ago
4
Fix non-portable C code from Extreme Deconvolution
#51
pcarbo
closed
5 years ago
4
Update license info to account for incorporation of Extreme Deconvolution code
#50
pcarbo
opened
5 years ago
0
Document accessor functions in `mash` call documentation
#49
gaow
opened
5 years ago
0
migrating away from the need for ED
#48
stephens999
opened
5 years ago
0
Posterior sample
#47
zouyuxin
closed
5 years ago
7
Update documentation for A and add output_posterior_cov option for R
#46
zouyuxin
closed
5 years ago
1
Prune identical / similar matrices in `Ulist`
#45
gaow
opened
5 years ago
2
Apparent bug when using outputlevel = 3
#44
lukeholman
closed
5 years ago
1
Idea about pairwise sign sharing
#43
lukeholman
opened
5 years ago
9
error: chol() decomposition failed
#42
lukeholman
closed
4 years ago
37
maybe warn user if data matrix is oriented wrongly
#41
willwerscheid
opened
6 years ago
0
Check V pd
#40
zouyuxin
closed
6 years ago
0
Add `algorithm version` in `mash_compute_posterior_matrices`
#39
zouyuxin
closed
6 years ago
0
Migrate more mash paper plots to mashr package
#38
gaow
opened
6 years ago
0
Data-driven priors based on betahat or z-scores
#37
gaow
opened
6 years ago
1
Add an option to compute and output posterior covariance matrices
#36
gaow
closed
6 years ago
0
log10BF goes to infinity
#35
gaow
closed
6 years ago
5
Modify mash data with `est_cor`
#34
gaow
opened
6 years ago
0
vignette to illustrate correlation
#33
stephens999
opened
6 years ago
0
Add check algorithm for commonbaseline method
#32
zouyuxin
closed
6 years ago
2
Add commonbaseline method.
#31
zouyuxin
closed
6 years ago
0
Fix bugs
#30
zouyuxin
closed
6 years ago
2
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