stephenslab / susieR

R package for "sum of single effects" regression.
https://stephenslab.github.io/susieR
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susie_plot file_prefix doesn't work #209

Open koujiaodahan opened 9 months ago

koujiaodahan commented 9 months ago

I try to run susie_plot(fitted_rss1,y="PIP",b=sumread$V9,file_prefix="./test") get the warning: Warning messages: 1: In plot.window(...) : "file_prefix" is not a graphical parameter 2: In plot.xy(xy, type, ...) : "file_prefix" is not a graphical parameter 3: In axis(side = side, at = at, labels = labels, ...) : "file_prefix" is not a graphical parameter 4: In axis(side = side, at = at, labels = labels, ...) : "file_prefix" is not a graphical parameter 5: In box(...) : "file_prefix" is not a graphical parameter 6: In title(...) : "file_prefix" is not a graphical parameter ![Uploading image.png…]()

and I didn't see the output in the specified directory

pcarbo commented 9 months ago

From what I can tell, file_prefix is only an input argument for susie_plot_iteration.