Closed guillaume-ramstein closed 4 years ago
no, you can't use SuSie here.
On Tue, Mar 10, 2020 at 2:54 PM guillaume-ramstein notifications@github.com wrote:
I would like to use SuSie to select candidates from a set of preselected markers (~100 preselected SNPs out of millions). One potential issue: markers were preselected for genome-wide significance (in GWAS). Can I still use SuSie, even though I'm choosing candidate causal variants from a nonrandom subset of markers?
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I would like to use SuSie to select candidates from a set of preselected markers (~100 preselected SNPs out of millions). One potential issue: markers were preselected for genome-wide significance (in GWAS). Can I still use SuSie, even though I'm choosing candidate causal variants from a nonrandom subset of markers?