stephpenn1 / STEEP-CF

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Thoughts on possible next steps #2

Open bpbond opened 1 year ago

bpbond commented 1 year ago

Ideas for discussion

Expanding the existing sensitivity analysis

Incorporating one or more of these expansions would absolutely produce a publishable paper! That said...

Fancier, more complete variance decomposition

From Alexey's paper:

Finally, we assessed which parameters contributed the most to parameter uncertainty for each model structure by performing a sensitivity and variance decomposition analysis following Dietze et al. (2014), LeBauer et al. (2013), and Raczka et al. (2018). Briefly, this analysis uses a spline to estimate the relationship between individual parameters and output variables (averaged across the entire simulation, 1902–1999) and then uses these splines to predict the variance in the output variable attributable to individual parameters (“partial variance”; see LeBauer et al., 2013 for more details).

From Dietze et al. 2014:

Figure 1 from Dietze et al. 2014

We can then look at the effect of each parameter after accounting for both the uncertainty of that parameter and the effect of other parameters. This is "partial variance":

Screen Shot 2023-08-05 at 5 25 58 PM

This is akin to @leeyap 's relative importance analysis, or the idea of Type III Sum of Squares, but accounts for parameter uncertainty. It's pretty cutting-edge.

bpbond commented 1 year ago

And reminding us about MAAT

Hi Ben, Stephanie, (& Matt, Rose), 

Good seeing/meeting you at the PI meeting and hearing about some of your work. I'm following up re MAAT and Millennial and other soil C models. 

I'd be happy to help get you up and running with MAAT and Millennial in MAAT, and try to deal with any issues you might run into. The code is open-source and more or less up to date. Though still very much a work in progress, there is a lot of utility in where it's at now.   

I'm including Matt and Rose who've done all the work developing the soil models and I'm sure will be happy to help too. 

Feel free to give us a shout whenever you have the headspace to start thinking about this and we can take it from there. 

All the best, 

Anthony