more methods - Githubissues

stevekm / nf-niceutils

nice utility methods for Nextflow pipelines

MIT License

1 stars 0 forks source link

more methods #2

Open stevekm opened 8 months ago

stevekm commented 8 months ago

some methods for consideration

versions YAML for multiqc, some examples here;
- https://github.com/nf-core/rnaseq/blob/1817d14a3a3a7d130b1fd729c5c3f9a6547b4fd5/subworkflows/nf-core/utils_nfcore_pipeline/main.nf
- https://github.com/stevekm/dumpSoftwareVersions
email template
saving params and other meta JSON's

stevekm commented 8 months ago

consider use of the new~ish "topic" channels and version output channels from Nextflow processes so we dont need to actually create a YAML in every process ; the methods in the plugin should be designed to use those as well

stevekm commented 7 months ago

see https://github.com/stevekm/nextflow-demos/tree/master/topic-channels-versions track issue here https://github.com/nextflow-io/nextflow/issues/4870