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stevekm / reportIT

IonTorrent variant reporting pipeline for clinical interpretation of cancer panel results
GNU General Public License v3.0
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'find' assertions and functions #15

Closed stevekm closed 7 years ago

stevekm commented 7 years ago

GNU find is used frequently in the pipeline to search for files for processing; pipeline often depends on only a single result being returned. Need to develop function to verify that only one item was returned, can be bundled with the function to check that file/dir exists. Also develop function to run find with given criteria but only return 'n' number of results, refactor this into pipeline.

stevekm commented 7 years ago

Will be implemented as-needed, prefer to simply use Python for future expansions when possible to deal with these types of issues easier.